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WGCNA package
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1
vote
0
replies
954
views
WGCNA trait order in heat map
wgcna
WGCNA
wgcna package
4.3 years ago
coyoung
▴ 10
0
votes
2
replies
2.5k
views
Module preservation WGCNA
wgcna
wgcna package
modulepreservation
updated 5.4 years ago by
Peter Langfelder
★ 3.0k • written 5.4 years ago by
bekah
▴ 40
0
votes
1
reply
2.0k
views
WGCNA: Matching eigengenes to samples
wgcna
wgcna package
5.4 years ago
Jack
• 0
0
votes
2
replies
1.2k
views
Using Kendall's Tau rank correlation coefficient for creating WGCNA network
wgcna package
wgcna
5.5 years ago
anni.djurhuus
• 0
2
votes
3
replies
1.5k
views
Problem for finding "Locus Link ID" from Annotation file
wgcna package
TCGA
LocusLinkID
genecode
ensembl
updated 5.5 years ago by
James W. MacDonald
65k • written 5.5 years ago by
modarzi
▴ 10
0
votes
2
replies
3.2k
views
TOMplot error: "color" is not a graphical parameter (WGCNA)
wgcna package
software error
updated 5.6 years ago by
Peter Langfelder
★ 3.0k • written 5.6 years ago by
giuseppe0525
• 0
0
votes
0
replies
1.1k
views
consensus module relationship
wgcna
wgcna package
consensus
5.6 years ago
2323982403
▴ 60
2
votes
4
replies
1.5k
views
Segfault error when loading WGCNA
wgcna
wgcna package
5.7 years ago • updated 5.6 years ago
antoinefelden
▴ 10
2
votes
2
replies
4.9k
views
WGCNA extract genes from a module
WGCNA
wgcna package
updated 5.7 years ago by
Peter Langfelder
★ 3.0k • written 5.7 years ago by
bdy8
▴ 10
1
vote
3
replies
1.3k
views
SampleNetwork in WGCNA
wgcna
wgcna package
5.7 years ago
2323982403
▴ 60
0
votes
0
replies
2.4k
views
Use of bicor in WGCNA
WGCNA
wgcna package
wgcna
bicor
5.7 years ago
bekah
▴ 40
12
votes
15
replies
15k
views
WGCNA: Understanding module-trait correlations
wgcna package
updated 5.8 years ago by
Peter Langfelder
★ 3.0k • written 5.8 years ago by
bekah
▴ 40
0
votes
0
replies
837
views
problem for finding soft power for constructing network in WGCNA algorithm
RNA-seq
WGCNA package
soft power
5.8 years ago
modarzi
▴ 10
13 results • Page
1 of 1
Recent ...
Replies
Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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